Selected publications

Publications that are part of the Web of Science database, possibly also other publications chosen by authors.

2021

• Illyes, TZ; Malinovska, L; Roth, E; Toth, B; Farkas, B; Korsak, M; Wimmerova, M; Kover, KE; Csavas, M, 2021: Synthesis of Tetravalent Thio- and Selenogalactoside-Presenting Galactoclusters and Their Interactions with Bacterial Lectin PA-IL from Pseudomonas aeruginosa. MOLECULES 26(3), doi: 10.3390/molecules26030542
• Houser, J; Kosourova, J; Kubickova, M; Wimmerova, M, 2021: Development of 48-condition buffer screen for protein stability assessment. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS , doi: 10.1007/s00249-021-01497-6

2020

• Kotsarenko, K; Vechtova, P; Lieskovska, J; Fussy, Z; Cabral-de-Mello, DC; Rego, ROM; Alberdi, P; Collins, M; Bell-Sakyi, L; Sterba, J; Grubhoffer, L, 2020: Karyotype changes in long-term cultured tick cell lines. SCIENTIFIC REPORTS 10(1), doi: 10.1038/s41598-020-70330-5
• Kotsarenko, K; Vechtova, P; Hammerova, Z; Langova, N; Malinovska, L; Wimmerova, M; Sterba, J; Grubhoffer, L, 2020: Newly identified DNA methyltransferases of Ixodes ricinus ticks. TICKS AND TICK-BORNE DISEASES 11(2), doi: 10.1016/j.ttbdis.2019.101348
• Houser, J; Kozmon, S; Mishra, D; Hammerova, Z; Wimmerova, M; Koca, J, 2020: The CH-pi Interaction in Protein-Carbohydrate Binding: Bioinformatics and In Vitro Quantification. CHEMISTRY-A EUROPEAN JOURNAL 26(47), p. 10769 - 10780, doi: 10.1002/chem.202000593
• Sykorova, P; Novotna, J; Demo, G; Pompidor, G; Dubska, E; Komarek, J; Fujdiarova, E; Houser, J; Haronikova, L; Varrot, A; Shilova, N; Imberty, A; Bovin, N; Pokorna, M; Wimmerova, M, 2020: Characterization of novel lectins from Burkholderia pseudomallei and Chromobacterium violaceum with seven-bladed beta-propeller fold. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES 152, p. 1113 - 1124, doi: 10.1016/j.ijbiomac.2019.10.200

2019

• Mrazkova, J; Malinovska, L; Wimmerova, M, 2019: Microscopy examination of red blood and yeast cell agglutination induced by bacterial lectins. PLOS ONE 14(7), doi: 10.1371/journal.pone.0220318
• Malinovska, L; Le, ST; Herczeg, M; Vaakova, M; Houser, J; Fujdiarova, E; Komarek, J; Hodek, P; Borbas, A; Wimmerova, M; Csavas, M, 2019: Synthesis of beta-d-galactopyranoside-Presenting Glycoclusters, Investigation of Their Interactions with Pseudomonas aeruginosa Lectin A (PA-IL) and Evaluation of Their Anti-Adhesion Potential. BIOMOLECULES 9(11), doi: 10.3390/biom9110686
• Geissner, A; Reinhardt, A; Rademacher, C; Johannssen, T; Monteiro, J; Lepenies, B; Thepaut, M; Fieschi, F; Mrazkova, J; Wimmerova, M; Schuhmacher, F; Gotze, S; Grunstein, D; Guo, XQ; Hahm, HS; Kandasamy, J; Leonori, D; Martin, CE; Parameswarappa, SG; Pasari, S; Schlegel, MK; Tanaka, H; Xiao, GZ; Yang, Y; Pereira, CL; Anish, C; Seeberger, PH, 2019: Microbe-focused glycan array screening platform. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 116(6), p. 1958 - 1967, doi: 10.1073/pnas.1800853116
• Faltinek, L; Fujdiarova, E; Melicher, F; Houser, J; Kasakova, M; Kondakov, N; Kononov, L; Parkan, K; Vidal, S; Wimmerova, M, 2019: Lectin PLL3, a Novel Monomeric Member of the Seven-Bladed beta-Propeller Lectin Family. MOLECULES 24(24), doi: 10.3390/molecules24244540
• Bonnardel, F; Kumar, A; Wimmerova, M; Lahmann, M; Perez, S; Varrot, A; Lisacek, F; Imberty, A, 2019: Architecture and Evolution of Blade Assembly in beta-propeller Lectins. STRUCTURE 27(5), p. 764 - +, doi: 10.1016/j.str.2019.02.002
• Le, ST; Malinovska, L; Vaskova, M; Mezo, E; Kelemen, V; Borbas, A; Hodek, P; Wimmerova, M; Csavas, M, 2019: Investigation of the Binding Affinity of a Broad Array of l-Fucosides with Six Fucose-Specific Lectins of Bacterial and Fungal Origin. MOLECULES 24(12), doi: 10.3390/molecules24122262
• Paulikova, G; Houser, J; Kasakova, M; Oroszova, B; Bertolotti, B; Parkan, K; Moravcova, J; Wimmerova, M, 2019: Fucosylated inhibitors of recently identified bangle lectin from Photorhabdus asymbiotica. SCIENTIFIC REPORTS 9, doi: 10.1038/s41598-019-51357-9

2018

• Jancarikova, G; Herczeg, M; Fujdiarova, E; Houser, J; Kover, KE; Borbas, A; Wimmerova, M; Csavas, M, 2018: Synthesis of alpha-L-Fucopyranoside-Presenting Glycoclusters and Investigation of Their Interaction with Photorhabdus asymbiotica Lectin (PHL). CHEMISTRY-A EUROPEAN JOURNAL 24(16), p. 4055 - 4068, doi: 10.1002/chem.201705853

2017

• Otrusinova, O; Demo, G; Padrta, P; Jasenakova, Z; Pekarova, B; Gelova, Z; Szmitkowska, A; Kaderavek, P; Jansen, S; Zachrdla, M; Klumpler, T; Marek, J; Hritz, J; Janda, L; Iwai, H; Wimmerova, M; Hejatko, J; Zidek, L, 2017: Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana. JOURNAL OF BIOLOGICAL CHEMISTRY 292(42), p. 17525 - 17540, doi: 10.1074/jbc.M117.790212
• Paniagua, C; Bilkova, A; Jackson, P; Dabravolski, S; Riber, W; Didi, V; Houser, J; Gigli-Bisceglia, N; Wimmerova, M; Budinska, E; Hamann, T; Hejatko, J, 2017: Dirigent proteins in plants: modulating cell wall metabolism during abiotic and biotic stress exposure. JOURNAL OF EXPERIMENTAL BOTANY 68(13), p. 3287 - 3301, doi: 10.1093/jxb/erx141
• Houser, J; Kozmon, S; Mishra, D; Mishra, SK; Romano, PR; Wimmerova, M; Koca, J, 2017: Influence of Trp flipping on carbohydrate binding in lectins. An example on Aleuria aurantia lectin AAL. PLOS ONE 12(12), doi: 10.1371/journal.pone.0189375
• Jancarikova, G; Houser, J; Dobes, P; Demo, G; Hyrsl, P; Wimmerova, M, 2017: Characterization of novel bangle lectin from Photorhabdus asymbiotica with dual sugar-binding specificity and its effect on host immunity. PLOS PATHOGENS 13(8), doi: 10.1371/journal.ppat.1006564

2016

• Fujdiarova, E; Gajdos, L; Wimmerova, M, 2016: Study of lectins from Photorhabdus luminescens to reveal their function in P. luminescens life cycle. FEBS JOURNAL 283, p. 152 - 152
• Norton, P; Comunale, MA; Herrera, H; Wang, MJ; Houser, J; Wimmerova, M; Romano, PR; Mehta, A, 2016: Development and application of a novel recombinant Aleuria aurantia lectin with enhanced core fucose binding for identification of glycoprotein biomarkers of hepatocellular carcinoma. PROTEOMICS 16(24), p. 3126 - 3136, doi: 10.1002/pmic.201600064
• Kerr, SC; Fischer, GJ; Sinha, M; McCabe, O; Palmer, JM; Choera, T; Lim, FY; Wimmerova, M; Carrington, SD; Yuan, SP; Lowell, CA; Oscarson, S; Keller, NP; Fahy, JV, 2016: FleA Expression in Aspergillus fumigatus Is Recognized by Fucosylated Structures on Mucins and Macrophages to Prevent Lung Infection. PLOS PATHOGENS 12(4), doi: 10.1371/journal.ppat.1005555
• Kumar, A; Sykorova, P; Demo, G; Dobes, P; Hyrsl, P; Wimmerova, M, 2016: A Novel Fucose-binding Lectin from Photorhabdus luminescens (PLL) with an Unusual Heptabladed beta-Propeller Tetrameric Structure. JOURNAL OF BIOLOGICAL CHEMISTRY 291(48), p. 25032 - 25049, doi: 10.1074/jbc.M115.693473

2015

• Houser, J; Komarek, J; Cioci, G; Varrot, A; Imberty, A; Wimmerova, M, 2015: Structural insights into Aspergillus fumigatus lectin specificity: AFL binding sites are functionally non-equivalent. ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 71, p. 442 - 453, doi: 10.1107/S1399004714026595
• Sykorova, P; Novotna, J; Demo, G; Dubska, E; Komarek, J; Haronikova, L; Varrot, A; Imberty, A; Pokorna, M; Wimmerova, M, 2015: Structure and specificity of lectin from bacterium Burkholderia pseudomallei. FEBS JOURNAL 282, p. 276 - 276
• Sehnal, D; Varekova, RS; Pravda, L; Ionescu, CM; Geidl, S; Horsky, V; Jaiswal, D; Wimmerova, M; Koca, J, 2015: ValidatorDB: database of up-to-date validation results for ligands and non-standard residues from the Protein Data Bank. NUCLEIC ACIDS RESEARCH 43(D1), p. D369 - D375, doi: 10.1093/nar/gku1118
• Noskova, L; Kubickova, B; Vaskova, L; Blahova, B; Wimmerova, M; Stiborova, M; Hodek, P, 2015: Fluorescent Cellular Assay for Screening Agents Inhibiting Pseudomonas aeruginosa Adherence. SENSORS 15(1), p. 1945 - 1953, doi: 10.3390/s150101945

2014

• Demo, G; Horska, V; Fliedrova, B; Stepan, J; Koca, J; Weignerova, L; Kren, V; Wimmerova, M, 2014: Protein engineering study of beta-mannosidase to set up a potential chemically efficient biocatalyst. GLYCOBIOLOGY 24(12), p. 1301 - 1311, doi: 10.1093/glycob/cwu074
• Varekova, RS; Jaiswal, D; Sehnal, D; Ionescu, CM; Geidl, S; Pravda, L; Horsky, V; Wimmerova, M; Koca, J, 2014: MotiveValidator: interactive web-based validation of ligand and residue structure in biomolecular complexes. NUCLEIC ACIDS RESEARCH 42(W1), p. W227 - W233, doi: 10.1093/nar/gku426
• Demo, G; Papouskova, V; Komarek, J; Kaderavek, P; Otrusinova, O; Srb, P; Rabatinova, A; Krasny, L; Zidek, L; Sklenar, V; Wimmerova, M, 2014: X-ray vs. NMR structure of N-terminal domain of delta-subunit of RNA polymerase. JOURNAL OF STRUCTURAL BIOLOGY 187(2), p. 174 - 186, doi: 10.1016/j.jsb.2014.06.001
• Kriz, Z; Adam, J; Mrazkova, J; Zotos, P; Chatzipavlou, T; Wimmerova, M; Koca, J, 2014: Engineering the Pseudomonas aeruginosa II lectin: designing mutants with changed affinity and specificity. JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN 28(9), p. 951 - 960, doi: 10.1007/s10822-014-9774-7

2013

• Houser, J; Komarek, J; Kostlanova, N; Cioci, G; Varrot, A; Kerr, SC; Lahmann, M; Balloy, V; Fahy, JV; Chignard, M; Imberty, A; Wimmerova, M, 2013: A Soluble Fucose-Specific Lectin from Aspergillus fumigatus Conidia - Structure, Specificity and Possible Role in Fungal Pathogenicity. PLOS ONE 8(12), doi: 10.1371/journal.pone.0083077
• Tvaroska, I; Kozmon, S; Wimmerova, M; Koca, J, 2013: A QM/MM Investigation of the Catalytic Mechanism of Metal-Ion-Independent Core 2 beta 1,6-N-Acetylglucosaminyltransferase. CHEMISTRY-A EUROPEAN JOURNAL 19(25), p. 8153 - 8162, doi: 10.1002/chem.201300383

2012

• Wimmerova, M; Kozmon, S; Necasova, I; Mishra, SK; Komarek, J; Koca, J, 2012: Stacking Interactions between Carbohydrate and Protein Quantified by Combination of Theoretical and Experimental Methods. PLOS ONE 7(10), doi: 10.1371/journal.pone.0046032
• Sehnal, D; Varekova, RS; Huber, HJ; Geidl, S; Ionescu, CM; Wimmerova, M; Koca, J, 2012: SiteBinder: An Improved Approach for Comparing Multiple Protein Structural Motifs. JOURNAL OF CHEMICAL INFORMATION AND MODELING 52(2), p. 343 - 359, doi: 10.1021/ci200444d
• Cecioni, S; Praly, JP; Matthews, SE; Wimmerova, M; Imberty, A; Vidal, S, 2012: Rational Design and Synthesis of Optimized Glycoclusters for Multivalent Lectin-Carbohydrate Interactions: Influence of the Linker Arm. CHEMISTRY-A EUROPEAN JOURNAL 18(20), p. 6250 - 6263, doi: 10.1002/chem.201200010
• Frommel, J; Soural, M; Tylichova, M; Kopecny, D; Demo, G; Wimmerova, M; Sebela, M, 2012: Plant aminoaldehyde dehydrogenases oxidize a wide range of nitrogenous heterocyclic aldehydes. AMINO ACIDS 43(3), p. 1189 - 1202, doi: 10.1007/s00726-011-1174-x
• Visacka, K; Hofr, C; Willcox, S; Necasova, I; Pavlouskova, J; Sepsiova, R; Wimmerova, M; Simonicova, L; Nosek, J; Fajkus, J; Griffith, JD; Tomaska, L, 2012: Synergism of the Two Myb Domains of Tay1 Protein Results in High Affinity Binding to Telomeres. JOURNAL OF BIOLOGICAL CHEMISTRY 287(38), p. 32206 - 32215, doi: 10.1074/jbc.M112.385591
• Tvaroska, I; Kozmon, S; Wimmerova, M; Koca, J, 2012: Substrate-Assisted Catalytic Mechanism of O-GIcNAc Transferase Discovered by Quantum Mechanics/Molecular Mechanics Investigation. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 134(37), p. 15563 - 15571, doi: 10.1021/ja307040m
• Mishra, S; Adamova, L; Adam, J; Wimmerova, M; Koca, J, 2012: Comparison of Docking Software to Predict Saccharide Binding to Proteins Combination with In silico Protein Engineering. GLYCOBIOLOGY 22(11), p. 1648 - 1649
• Marchetti, R; Malinovska, L; Lameignere, E; Adamova, L; de Castro, C; Cioci, G; Stanetty, C; Kosma, P; Molinaro, A; Wimmerova, M; Imberty, A; Silipo, A, 2012: Burkholderia cenocepacia lectin A binding to heptoses from the bacterial lipopolysaccharide. GLYCOBIOLOGY 22(10), p. 1387 - 1398, doi: 10.1093/glycob/cws105
• Mishra, SK; Adam, J; Wimmerova, M; Koca, J, 2012: In Silico Mutagenesis and Docking Study of Ralstonia solanacearum RSL Lectin: Performance of Docking Software To Predict Saccharide Binding. JOURNAL OF CHEMICAL INFORMATION AND MODELING 52(5), p. 1250 - 1261, doi: 10.1021/ci200529n
• Audfray, A; Claudinon, J; Abounit, S; Ruvoen-Clouet, N; Larson, G; Smith, DF; Wimmerova, M; Le Pendu, J; Romer, W; Varrot, A; Imberty, A, 2012: Fucose-binding Lectin from Opportunistic Pathogen Burkholderia ambifaria Binds to Both Plant and Human Oligosaccharidic Epitopes. JOURNAL OF BIOLOGICAL CHEMISTRY 287(6), p. 4335 - 4347, doi: 10.1074/jbc.M111.314831

2011

• Cecioni, S; Faure, S; Darbost, U; Bonnamour, I; Parrot-Lopez, H; Roy, O; Taillefumier, C; Wimmerova, M; Praly, JP; Imberty, A; Vidal, S, 2011: Selectivity among Two Lectins: Probing the Effect of Topology, Multivalency and Flexibility of ´Clicked´ Multivalent Glycoclusters. CHEMISTRY-A EUROPEAN JOURNAL 17(7), p. 2146 - 2159, doi: 10.1002/chem.201002635
• Sulak, O; Cioci, G; Lameignere, E; Balloy, V; Round, A; Gutsche, I; Malinovska, L; Chignard, M; Kosma, P; Aubert, DF; Marolda, CL; Valvano, MA; Wimmerova, M; Imberty, A, 2011: Burkholderia cenocepacia BC2L-C Is a Super Lectin with Dual Specificity and Proinflammatory Activity. PLOS PATHOGENS 7(9), doi: 10.1371/journal.ppat.1002238
• Havel, V; Svec, J; Wimmerova, M; Dusek, M; Pojarova, M; Sindelar, V, 2011: Bambus[n]urils: a New Family of Macrocyclic Anion Receptors. ORGANIC LETTERS 13(15), p. 4000 - 4003, doi: 10.1021/ol201515c
• Revesz, A; Schroder, D; Svec, J; Wimmerova, M; Sindelar, V, 2011: Anion Binding by Bambus[6]uril Probed in the Gas Phase and in Solution. JOURNAL OF PHYSICAL CHEMISTRY A 115(41), p. 11378 - 11386, doi: 10.1021/jp205218k