Jiří Nováček, Ph.D.

Publications that are part of the Web of Science database, possibly also other publications chosen by authors.

2021

• Nagy, B; Polak, M; Ozohanics, O; Zambo, Z; Szabo, E; Hubert, A; Jordan, F; Novacek, J; Adam-Vizi, V; Ambrus, A, 2021: Structure of the dihydrolipoamide succinyltransferase (E2) component of the human alpha-ketoglutarate dehydrogenase complex (hKGDHc) revealed by cryo-EM and cross-linking mass spectrometry: Implications for the overall hKGDHc structure. BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS 1865(6), doi: 10.1016/j.bbagen.2021.129889
• Mukhamedova, L; Fuzik, T; Novacek, J; Hrebik, D; Pridal, A; Marti, GA; Guerin, DMA; Plevka, P, 2021: Virion Structure and In Vitro Genome Release Mechanism of Dicistrovirus Kashmir Bee Virus. JOURNAL OF VIROLOGY 95(11), doi: 10.1128/JVI.01950-20

2020

• Kouba, T; Koval, T; Sudzinova, P; Pospisil, J; Brezovska, B; Hnilicova, J; Sanderova, H; Janouskova, M; Sikova, M; Halada, P; Sykora, M; Barvik, I; Novacek, J; Trundova, M; Duskova, J; Skalova, T; Chon, U; Murakami, KS; Dohnalek, J; Krasny, L, 2020: Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase. NATURE COMMUNICATIONS 11(1), doi: 10.1038/s41467-020-20158-4
• Plochberger, B; Sych, T; Weber, F; Novacek, J; Axmann, M; Stangl, H; Sezgin, E, 2020: Lipoprotein Particles Interact with Membranes and Transfer Their Cargo without Receptors. BIOCHEMISTRY 59(45), p. 4421 - 4428, doi: 10.1021/acs.biochem.0c00748

2019

• Bertolla, L; Dlouhy, I; Bartonickova, E; Tousek, J; Novacek, J; Macova, P, 2019: Deconstruction of microfibrillated cellulose into nanocrystalline cellulose rods and mesogenic phase formation in concentrated low-modulus sodium silicate solutions. CELLULOSE 26(7), p. 4325 - 4344, doi: 10.1007/s10570-019-02364-6
• Axmann, M; Sezgin, E; Karner, A; Novacek, J; Brodesser, MD; Rohrl, C; Preiner, J; Stangl, H; Plochberger, B, 2019: Receptor-Independent Transfer of Low Density Lipoprotein Cargo to Biomembranes. NANO LETTERS 19(4), p. 2562 - 2567, doi: 10.1021/acs.nanolett.9b00319
• Kasari, V; Pochopien, AA; Margus, T; Murina, V; Turnbull, K; Zhou, Y; Nissan, T; Graf, M; Novacek, J; Atkinson, GC; Johansson, MJO; Wilson, DN; Hauryliuk, V, 2019: A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling. NUCLEIC ACIDS RESEARCH 47(16), p. 8807 - 8820, doi: 10.1093/nar/gkz600
• Nagy, B; Ambrus, A; Zambo, Z; Hubert, A; Polak, M; Szabo, E; Novacek, J; Jordan, F; Adam-Vizi, V, 2019: CRYO-EM STRUCTURE OF THE DIHYDROLIPOAMIDE SUCCINYLTRANSFERASE (E2) COMPONENT OF THE HUMAN ALPHA-KETOGLUTARATE DEHYDROGENASE COMPLEX. PROTEIN SCIENCE 28, p. 155 - 155
• Kezar, A; Kavcic, L; Polak, M; Novacek, J; Gutierrez-Aguirre, I; Znidaric, MT; Co, A; Stare, K; Gruden, K; Ravnikar, M; Pahovnik, D; Zagar, E; Merzel, F; Anderluh, G; Podobnik, M, 2019: Structural basis for the multitasking nature of the potato virus Y coat protein. SCIENCE ADVANCES 5(7), doi: 10.1126/sciadv.aaw3808

2018

• Evangelidis, T; Nerli, S; Novacek, J; Brereton, AE; Karplus, PA; Dotas, RR; Venditti, V; Sgourakis, NG; Tripsianes, K, 2018: Automated NMR resonance assignments and structure determination using a minimal set of 4D spectra. NATURE COMMUNICATIONS 9, doi: 10.1038/s41467-017-02592-z
• Spirek, M; Mlcouskova, J; Belan, O; Gyimesi, M; Harami, G.M; Molnar, E; Novacek, J; Kovacs, M; Krejci, L, 2018: Human RAD51 rapidly forms intrinsically dynamic nucleoprotein filaments modulated by nucleotide binding state. NUCLEIC ACIDS RESEARCH
• Benesik, M; Novacek, J; Janda, L; Dopitova, R; Pernisova, M; Melkova, K; Tisakova, L; Doskar, J; Zidek, L; Hejatko, J; Pantucek, R, 2018: Role of SH3b binding domain in a natural deletion mutant of Kayvirus endolysin LysF1 with a broad range of lytic activity. VIRUS GENES 54(1), p. 130 - 139, doi: 10.1007/s11262-017-1507-2
• Clark, S; Myers, JB; King, A; Fiala, R; Novacek, J; Pearce, G; Heierhorst, J; Reichow, SL; Barbar, EJ, 2018: Multivalency regulates activity in an intrinsically disordered transcription factor. ELIFE 7, doi: 10.7554/eLife.36258
• Sicorello, A; Kelly, G; Oregioni, A; Novacek, J; Sklenar, V; Pastore, A, 2018: The Structural Properties in Solution of the Intrinsically Mixed Folded Protein Ataxin-3. BIOPHYSICAL JOURNAL 115(1), p. 59 - 71, doi: 10.1016/j.bpj.2018.05.029
• Melkova, K; Zapletal, V; Jansen, S; Nomilner, E; Zachrdla, M; Hritz, J; Novacek, J; Zweckstetter, M; Jensen, MR; Blackledge, M; Zidek, L, 2018: Functionally specific binding regions of microtubule-associated protein 2c exhibit distinct conformations and dynamics. JOURNAL OF BIOLOGICAL CHEMISTRY 293(34), p. 13297 - 13309, doi: 10.1074/jbc.RA118.001769
• Plochberger, B; Roehrl, C; Preiner, J; Karner, A; Axmann, M; Novacek, J; Sezgin, E; Eggeling, C; Hinterndorfer, P; Schuetz, GJ; Stangl, H, 2018: INTERACTION OF LIPOPROTEIN PARTICLES WITH LIPID BILAYER-MEMBRANES. ATHEROSCLEROSIS 275, p. E23 - E23, doi: 10.1016/j.atherosclerosis.2018.06.054
• Crowe-McAuliffe, C; Graf, M; Huter, P; Takada, H; Abdelshahid, M; Novacek, J; Murina, V; Atkinson, GC; Hauryliuk, V; Wilson, DN, 2018: Structural basis for antibiotic resistance mediated by the Bacillus subtilis ABCF ATPase VmlR. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 115(36), p. 8978 - 8983, doi: 10.1073/pnas.1808535115

2017

• Huter, P; Arenz, S; Bock, LV; Graf, M; Frister, JO; Heuer, A; Peil, L; Starosta, AL; Wohlgemuth, I; Peske, F; Novacek, J; Berninghausen, O; Grubmuller, H; Tenson, T; Beckmann, R; Rodnina, MV; Vaiana, AC; Wilson, DN, 2017: Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P. MOLECULAR CELL 68(3), p. 515 - +, doi: 10.1016/j.molcel.2017.10.014
• Srb, P; Novacek, J; Kaderavek, P; Rabatinova, A; Krasny, L; Zidkova, J; Bobalova, J; Sklenar, V; Zidek, L, 2017: Triple resonance NMR relaxation experiments for studies of intrinsically disordered proteins. JOURNAL OF BIOMOLECULAR NMR 69(3), p. 133 - 146, doi: 10.1007/s10858-017-0138-1
• Skubnik, K; Novacek, J; Fuzik, T; Pridal, A; Paxton, RJ; Plevka, P, 2017: Structure of deformed wing virus, a major honey bee pathogen. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 114(12), p. 3210 - 3215, doi: 10.1073/pnas.1615695114
• Kacirova, M; Novacek, J; Man, P; Obsilova, V; Obsil, T, 2017: Structural Basis for the 14-3-3 Protein-Dependent Inhibition of Phosducin Function. BIOPHYSICAL JOURNAL 112(7), p. 1339 - 1349, doi: 10.1016/j.bpj.2017.02.036
• Jansen, S; Melkova, K; Trosanova, Z; Hanakova, K; Zachrdla, M; Novacek, J; Zupa, E; Zdrahal, Z; Hritz, J; Zidek, L, 2017: Quantitative mapping of microtubule-associated protein 2c (MAP2c) phosphorylation and regulatory protein 14-3-3 zeta-binding sites reveals key differences between MAP2c and its homolog Tau. JOURNAL OF BIOLOGICAL CHEMISTRY 292(16), p. 6715 - 6727, doi: 10.1074/jbc.M116.771097
• PEKAŘÍK, V.; PEŠKOVÁ, M.; GURÁŇ, R.; NOVÁČEK, J.; HEGER, Z.; TRIPSIANES, K.; KUMAR, J.; ADAM, V., 2017: Visualization of stable ferritin complexes with palladium, rhodium and iridium nanoparticles detected by their catalytic activity in native polyacrylamide gels. DALTON TRANSACTIONS 46(40), p. 13690 - 5, doi: 10.1039/c7dt02818k; FULL TEXT
• Lousa, P; Nedozralova, H; Zupa, E; Novacek, J; Hritz, J, 2017: Phosphorylation of the regulatory domain of human tyrosine hydroxylase 1 monitored using non-uniformly sampled NMR. BIOPHYSICAL CHEMISTRY 223, p. 25 - 29, doi: 10.1016/j.bpc.2017.01.003

2016

• Perczel, A; Atanasov, AG; Sklenar, V; Novacek, J; Papouskova, V; Kaderavek, P; Zidek, L; Kozlowski, H; Watly, J; Hecel, A; Kolkowska, P; Koca, J; Svobodova-Varekova, R; Pravda, L; Sehnal, D; Horsky, V; Geidl, S; Enriz, RD; Matejka, P; Jenistova, A; Dendisova, M; Kokaislova, A; Weissig, V; Olsen, M; Coffey, A; Ajuebor, J; Keary, R; Sanz-Gaitero, M; Raaij, MJ; McAuliffe, O; Waltenberger, B; Mocan, A; Smejkal, K; Heis, EH; Diederich, M; Musiol, R; Kosmrlj, J; Polanski, J; Jampilek, J, 2016: The Eighth Central European Conference ´´Chemistry towards Biology´´: Snapshot. MOLECULES 21(10), doi: 10.3390/molecules21101381
• Mullapudi E; Nováček J; Pálková L; Kulich P; Lindberg AM; van Kuppeveld FJ; Plevka P, 2016: Structure and genome release mechanism of human cardiovirus Saffold virus-3. JOURNAL OF VIROLOGY , p. [Epub ahead of print] -
• Nováček J; Šiborová M; Benešík M; Pantůček R; Doškař J; Plevka P, 2016: Structure and genome release of Twort-like Myoviridae phage with a double-layered baseplate. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 113(33), p. 9351 - 6, doi: 10.1073/pnas.1605883113
• Graf M; Arenz S; Huter P; Dönhöfer A; Nováček J; Wilson DN, 2016: Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions. NUCLEIC ACIDS RESEARCH , p. [Epub ahead of print] - , doi: 10.1093/nar/gkw1272
• Mullapudi, E; Novacek, J; Palkova, L; Kulich, P; Lindberg, AM; van Kuppeveld, FJM; Plevka, P, 2016: Structure and Genome Release Mechanism of the Human Cardiovirus Saffold Virus 3. JOURNAL OF VIROLOGY 90(17), p. 7628 - 7639, doi: 10.1128/JVI.00746-16
• Kubicek, K; Krejcikova, M; Brazda, P; Smirakova, E; Novacek, J; Cramer, P; Stefl, R, 2016: What are the key aspects of interaction between RNA polymerase II C-terminal domain phosphorylated on tyrosine-1 and the elongation factors. FEBS JOURNAL 283, p. 21 - 21

2015

• MacRaild, CA; Zachrdla, M; Andrew, D; Krishnarjuna, B; Novacek, J; Zidek, L; Sklenar, V; Richards, JS; Beeson, JG; Anders, RF; Norton, RS, 2015: Conformational Dynamics and Antigenicity in the Disordered Malaria Antigen Merozoite Surface Protein 2. PLOS ONE 10(3), doi: 10.1371/journal.pone.0119899
• Kuban, V; Novacek, J; Bumba, L; Zidek, L, 2015: NMR assignment of intrinsically disordered self-processing module of the FrpC protein of Neisseria meningitidis. BIOMOLECULAR NMR ASSIGNMENTS 9(2), p. 435 - 440, doi: 10.1007/s12104-015-9625-z
• Kacirova, M; Novacek, J; Man, P; Kadek, A; Obsilova, V; Obsil, T, 2015: Biophysical characterization of phosducin and its complex with the 14-3-3 protein. PROTEIN SCIENCE 24, p. 124 - 124

2013

• Valencia, RG; Walko, G; Janda, L; Novacek, J; Mihailovska, E; Reipert, S; Andra-Marobela, K; Wiche, G, 2013: Intermediate filament-associated cytolinker plectin 1c destabilizes microtubules in keratinocytes. MOLECULAR BIOLOGY OF THE CELL 24(6), p. 768 - 784, doi: 10.1091/mbc.E12-06-0488

2012

• Novacek, J; Haba, NY; Chill, JH; Zidek, L; Sklenar, V, 2012: 4D Non-uniformly sampled HCBCACON and (1) J(NC alpha)-selective HCBCANCO experiments for the sequential assignment and chemical shift analysis of intrinsically disordered proteins. JOURNAL OF BIOMOLECULAR NMR 53(2), p. 139 - 148, doi: 10.1007/s10858-012-9631-8

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