Contact
Email: | |
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Phone: | +420 54949 3847 |
Research group: | Protein Structure and Dynamics - Lukáš Žídek |
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15. Nov. 2019
90 Dutch Students Visited CEITEC as Part of an International Science-Focused Study Trip
CEITEC Masaryk University hosted approximately 90 students from the Netherlands on 12 November 2019. The visiting students are enrolled in second and…
28. May 2018
Strategic Alliance for Discovery and Development of new Treatments for Cancer and Neurodegenerative Diseases
DyNAbind GmbH and CEITEC – Central European Institute of Technology announced that they have entered a strategic alliance for the discovery and…
Publications that are part of the Web of Science database, possibly also other publications chosen by authors.
2021
- Subadini, S; Bera, K; Hritz, J; Sahoo, H, 2021: Polyethylene glycol perturbs the unfolding of CRABP I: A correlation between experimental and theoretical approach. COLLOIDS AND SURFACES B-BIOINTERFACES 202, doi: 10.1016/j.colsurfb.2021.111696
- Bera, K; Reeda, VSJ; Babila, PR; Dinesh, DC; Hritz, J; Karthick, T, 2021: An in silico molecular dynamics simulation study on the inhibitors of SARS-CoV-2 proteases (3CL(pro) and PLpro) to combat COVID-19. MOLECULAR SIMULATION , doi: 10.1080/08927022.2021.1957884
- Gvarjaladze, D; Gulua, T; Gogichaishvili, S; Hritz, J; Metrevel, N, 2021: Quadruplex Priming Amplification at a Range of Human Body Temperature. BIOINTERFACE RESEARCH IN APPLIED CHEMISTRY 11(1), p. 7932 - 7942, doi: 10.33263/BRIAC111.79327942
- Hofrova, A; Lousa, P; Kubickova, M; Hritz, J; Otasevic, T; Repko, M; Knight, A; Piskacek, M, 2021: Universal two-point interaction of mediator KIX with 9aaTAD activation domains. JOURNAL OF CELLULAR BIOCHEMISTRY , doi: 10.1002/jcb.30075
2020
- Zapletal, V; Mladek, A; Melkova, K; Lousa, P; Nomilner, E; Jasenakova, Z; Kuban, V; Makovicka, M; Lanikova, A; Zidek, L; Hritz, J, 2020: Choice of Force Field for Proteins Containing Structured and Intrinsically Disordered Regions. BIOPHYSICAL JOURNAL 118(7), p. 1621 - 1633, doi: 10.1016/j.bpj.2020.02.019
- Kuban, V; Macek, P; Hritz, J; Nechvatalova, K; Nedbalcova, K; Faldyna, M; Sebo, P; Zidek, L; Bumba, L, 2020: Structural Basis of Ca2+-Dependent Self-Processing Activity of Repeat-in-Toxin Proteins. MBIO 11(2), doi: 10.1128/mBio.00226-20
2019
- Melkova, K; Zapletal, V; Narasimhan, S; Jansen, S; Hritz, J; Skrabana, R; Zweckstetter, M; Ringkjobing Jensen, M; Blackledge, M; Zidek, L, 2019: Structure and Functions of Microtubule Associated Proteins Tau and MAP2c: Similarities and Differences. BIOMOLECULES 9(3), doi: 10.3390/biom9030105
- Precechtelova J P; Mladek, A; Zapletal, V; Hritz, J , 2019: Quantum Chemical Calculations of NMR Chemical Shifts in Phosphorylated Intrinsically Disordered Proteins. JOURNAL OF CHEMICAL THEORY AND COMPUTATION 10(15), p. 5642 - 5658, doi: 10.1021/acs.jctc.8b00257
2018
- Melkova, K; Zapletal, V; Jansen, S; Nomilner, E; Zachrdla, M; Hritz, J; Novacek, J; Zweckstetter, M; Jensen, MR; Blackledge, M; Zidek, L, 2018: Functionally specific binding regions of microtubule-associated protein 2c exhibit distinct conformations and dynamics. JOURNAL OF BIOLOGICAL CHEMISTRY 293(34), p. 13297 - 13309, doi: 10.1074/jbc.RA118.001769
- Jandova, Z; Trosanova, Z; Weisova, V; Oostenbrink, C; Hritz, J, 2018: Free energy calculations on the stability of the 14-3-3 zeta protein. BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 1866(3), p. 442 - 450, doi: 10.1016/j.bbapap.2017.11.012
2017
- Otrusinova, O; Demo, G; Padrta, P; Jasenakova, Z; Pekarova, B; Gelova, Z; Szmitkowska, A; Kaderavek, P; Jansen, S; Zachrdla, M; Klumpler, T; Marek, J; Hritz, J; Janda, L; Iwai, H; Wimmerova, M; Hejatko, J; Zidek, L, 2017: Conformational dynamics are a key factor in signaling mediated by the receiver domain of a sensor histidine kinase from Arabidopsis thaliana. JOURNAL OF BIOLOGICAL CHEMISTRY 292(42), p. 17525 - 17540, doi: 10.1074/jbc.M117.790212
- Nagy, G; Oostenbrink, C; Hritz, J, 2017: Exploring the binding pathways of the 14-3-3ζ protein: Structural and free-energy profiles revealed by Hamiltonian replica exchange molecular dynamics with distancefield distance restraints. PLOS ONE 7(12), doi: 10.1371/journal.pone.0180633
- Jansen, S; Melkova, K; Trosanova, Z; Hanakova, K; Zachrdla, M; Novacek, J; Zupa, E; Zdrahal, Z; Hritz, J; Zidek, L, 2017: Quantitative mapping of microtubule-associated protein 2c (MAP2c) phosphorylation and regulatory protein 14-3-3 zeta-binding sites reveals key differences between MAP2c and its homolog Tau. JOURNAL OF BIOLOGICAL CHEMISTRY 292(16), p. 6715 - 6727, doi: 10.1074/jbc.M116.771097
- Lousa, P; Nedozralova, H; Zupa, E; Novacek, J; Hritz, J, 2017: Phosphorylation of the regulatory domain of human tyrosine hydroxylase 1 monitored using non-uniformly sampled NMR. BIOPHYSICAL CHEMISTRY 223, p. 25 - 29, doi: 10.1016/j.bpc.2017.01.003
- Zapletal, V; Mladek, A; Hritz, J; Zidek, L, 2017: Computational characterization of hybrid proteins containing ordered and intrinsically disordered regions. FEBS JOURNAL 284, p. 321 - 321
- Nagy, G; Oostenbrink, C; Hritz, J, 2017: Exploring the binding pathways of the 14-3-3 zeta : protein Structural and free-energy profiles revealed by Hamiltonian replica exchange molecular dynamics with distancefield distance restraints. PLOS ONE 12(7), doi: 10.1371/journal.pone.0180633
- Melkova, K; Jansen, S; Hritz, J; Zidek, L, 2017: NMR characterization of intrinsically disordered microtubule associated protein 2c. FEBS JOURNAL 284, p. 321 - 322
2015
- Mitra, M; Singer, D; Mano, Y; Hritz, J; Nam, G; Gorelick, RJ; Byeon, IJL; Gronenborn, AM; Iwatani, Y; Levin, JG, 2015: Sequence and structural determinants of human APOBEC3H deaminase and anti-HIV-1 activities. RETROVIROLOGY 12, doi: 10.1186/s12977-014-0130-8
2014
- Gardner, CL; Hritz, J; Sun, CQ; Vanlandingham, DL; Song, TY; Ghedin, E; Higgs, S; Klimstra, WB; Ryman, KD, 2014: Deliberate Attenuation of Chikungunya Virus by Adaptation to Heparan Sulfate-Dependent Infectivity: A Model for Rational Arboviral Vaccine Design. PLOS NEGLECTED TROPICAL DISEASES 8(2), doi: 10.1371/journal.pntd.0002719
- Hritz, J; Byeon, IJL; Krzysiak, T; Martinez, A; Sklenar, V; Gronenborn, AM, 2014: Dissection of Binding between a Phosphorylated Tyrosine Hydroxylase Peptide and 14-3-3 zeta: A Complex Story Elucidated by NMR. BIOPHYSICAL JOURNAL 107(9), p. 2185 - 2194, doi: 10.1016/j.bpj.2014.08.039
- Lui, VWY; Peyser, ND; Ng, PKS; Hritz, J; Zeng, Y; Lu, YL; Li, H; Wang, L; Gilbert, BR; General, IJ; Bahar, I; Ju, ZL; Wang, ZH; Pendleton, KP; Xiao, X; Du, Y; Vries, JK; Hammerman, PS; Garraway, LA; Mills, GB; Johnson, DE; Grandis, JR, 2014: Frequent mutation of receptor protein tyrosine phosphatases provides a mechanism for STAT3 hyperactivation in head and neck cancer. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 111(3), p. 1114 - 1119, doi: 10.1073/pnas.1319551111
- Integrative structural biology of pathological tau protein, an appealing therapeutic target for Alzheimer´s disease, , 2020 - 2023
- Selektivní NMR značení jako nástroj pro charakterizaci proteinových komplexů zapojených do neurodegenerativních onemocnění, Ministerstvo školství, mládeže a tělovýchovy ČR, 2019 - 2022
- Characterization of intrinsically disordered proteins, Grantová agentura ČR, 2020 - 2022
- CIISB - Česká infrastruktura pro integrativní strukturní biologii pro lidské zdraví (CZ.02.1.01/0.0/0.0/16_013/0001776), Ministerstvo školství, mládeže a tělovýchovy ČR, 2017 - 2021
- iNEXT - Infrastructure for NMR, EM and X-ray crystallography for translational research (653706), Evropská unie, 2015 - 2019
- Kit pro screening potenciálních léčiv indukujících monomerizaci 14-3-3 (MUNI/71/55952/2016), Masarykova univerzita, 2017 - 2018
- Efektivní výpočty volných energií a konfiguračního vzorkování protein-proteinových interakcí (I 1999-N28), Czech Science Foundation - International Projects, 2015 - 2017
- Podjednotky urcující DNA specificitu bakteriální RNA polymerázy s flexibilními doménami: funkce a dynamika (GA13-16842S), Grantová agentura ČR, 2013 - 2017
- Efektivní výpočty volných energií a konfiguračního vzorkování protein-proteinových interakcí, Grantová agentura ČR, 2015 - 2017
- Design of fluorescence-based analytical tool for quantification of the protein-protein interaction within the 14-3-3 family (7AMB16DE005), Ministerstvo školství, mládeže a tělovýchovy ČR, 2016 - 2017
- Structural determination of the human 14-3-3zeta in complex with a double phosphorylated human tyrosine hydroxylase 1 (4SGA8679), Jihomoravský kraj, 2014 - 2016
- Studium protein-proteinových interakcí pomocí molekulárních simulací (7AMB15AT029), Ministerstvo školství, mládeže a tělovýchovy ČR, 2015 - 2016
- Detailed binding scheme and structural determination of the 14-3-3ζ in complex with a double phosphorylated human tyrosine hydroxylase 1 (618460), Evropská unie, 2013 - 2014