Vasileios Bikos, Ph.D.

Publications that are part of the Web of Science database, possibly also other publications chosen by authors.

2019

• Xochelli, A; Bikos, V; Polychronidou, E; Galigalidou, C; Agathangelidis, A; Charlotte, F; Moschonas, P; Davis, Z; Colombo, M; Roumelioti, M; Sutton, LA; Groenen, P; van den Brand, M; Boudjoghra, M; Algara, P; Traverse-Glehen, A; Ferrer, A; Stalika, E; Karypidou, M; Kanellis, G; Kalpadakis, C; Mollejo, M; Pangalis, G; Vlamos, P; Amini, RM; Pospisilova, S; Gonzalez, D; Ponzoni, M; Anagnostopoulos, A; Giudicelli, V; Lefranc, MP; Espinet, B; Panagiotidis, P; Piris, MA; Du, MQ; Rosenquist, R; Papadaki, T; Belessi, C; Ferrarini, M; Oscier, D; Tzovaras, D; Ghia, P; Davi, F; Hadzidimitriou, A; Stamatopoulos, K, 2019: Disease-biased and shared characteristics of the immunoglobulin gene repertoires in marginal zone B cell lymphoproliferations. JOURNAL OF PATHOLOGY 247(4), p. 416 - 421, doi: 10.1002/path.5209
• Hernandez-Sanchez, M; Kotaskova, J; Rodriguez, AE; Radova, L; Tamborero, D; Abaigar, M; Plevova, K; Benito, R; Tom, N; Quijada-Alamo, M; Bikos, V; Martin, AA; Pal, K; de Coca, AG; Doubek, M; Lopez-Bigas, N; Hernandez-Rivas, JM; Pospisilova, S, 2019: CLL cells cumulate genetic aberrations prior to the first therapy even in outwardly inactive disease phase. LEUKEMIA 33(2), p. 518 - 522, doi: 10.1038/s41375-018-0255-1

2018

• Lobello, C; Bikos, V; Janikova, A; Pospisilova, S, 2018: The Role of Oncogenic Tyrosine Kinase NPM-ALK in Genomic Instability. CANCERS 10(3), doi: 10.3390/cancers10030064
• Brazdilova, K; Plevova, K; Francova, HS; Kockova, H; Borsky, M; Bikos, V; Malcikova, J; Oltova, A; Kotaskova, J; Tichy, B; Brychtova, Y; Mayer, J; Doubek, M; Pospisilova, S, 2018: Multiple productive IGH rearrangements denote oligoclonality even in immunophenotypically monoclonal CLL. LEUKEMIA 32(1), p. 234 - 236, doi: 10.1038/leu.2017.274
• Polychronidou, E; Kalamaras, I; Agathangelidis, A; Sutton, LA; Yan, XJ; Bikos, V; Vardi, A; Mochament, K; Chiorazzi, N; Belessi, C; Rosenquist, R; Ghia, P; Stamatopoulos, K; Vlamos, P; Chailyan, A; Overby, N; Marcatili, P; Hatzidimitriou, A; Tzovaras, D, 2018: Automated shape-based clustering of 3D immunoglobulin protein structures in chronic lymphocytic leukemia. BMC BIOINFORMATICS 19, doi: 10.1186/s12859-018-2381-1

2017

• Vardi, A; Vlachonikola, E; Karypidou, M; Stalika, E; Bikos, V; Gemenetzi, K; Maramis, C; Siorenta, A; Anagnostopoulos, A; Pospisilova, S; Maglaveras, N; Chouvarda, I; Stamatopoulos, K; Hadzidimitriou, A, 2017: Restrictions in the T-cell repertoire of chronic lymphocytic leukemia: high-throughput immunoprofiling supports selection by shared antigenic elements. LEUKEMIA 31(7), p. 1555 - 1561, doi: 10.1038/leu.2016.362
• Rodriguez-Vicente, AE; Bikos, V; Hernandez-Sanchez, M; Malcikova, J; Hernandez-Rivas, JM; Pospisilova, S, 2017: Next-generation sequencing in chronic lymphocytic leukemia: recent findings and new horizons. ONCOTARGET 8(41), p. 71234 - 71248, doi: 10.18632/oncotarget.19525

2016

• Hernandez-Sanchez, M; Radova, L; Kotaskova, J; Tamborero, D; Rodriguez, AE; Plevova, K; Abaigar, M; Bikos, V; Benito, R; Takacova, S; Quijada, M; Martin, AA; Alcoceba, M; de Coca, AG; Doubek, M; Gonzalez, M; Lopez-Bigas, N; Pospisilova, S; Hernandez-Rivas, JM, 2016: Analysis of Clonal Evolution in Chronic Lymphocytic Leukemia from Inactive to Symptomatic Disease Prior Treatment Using Whole-Exome Sequencing. BLOOD 128(22)
• Turchaninova, MA; Davydov, A; Britanova, OV; Shugay, M; Bikos, V; Egorov, ES; Kirgizova, VI; Merzlyak, EM; Staroverov, DB; Bolotin, DA; Mamedov, IZ; Izraelson, M; Logacheva, MD; Kladova, O; Plevova, K; Pospisilova, S; Chudakov, DM, 2016: High-quality full-length immunoglobulin profiling with unique molecular barcoding. NATURE PROTOCOLS 11(9), p. 1599 - 1616, doi: 10.1038/nprot.2016.093

2015

• Agathangelidis, A; Bystry, V; Hadzidimitriou, A; Sutton, LA; Minga, E; Kienle, D; Davis, Z; Yan, XJ; Shanafelt, T; Boudjogra, M; Plevova, K; Gounari, M; Xochelli, A; Navarro, A; Chatzouli, M; Pedersen, LB; Baliakas, P; Scarfo, L; Rossi, D; Veronese, S; Facco, M; Bikos, V; Karan-Djurasevic, T; Pavlovic, S; Mansouri, L; Poiron, C; Chu, CC; Stalika, E; Giudicelli, V; Panagiotidis, P; Sudarikov, A; Anagnostopoulos, A; Trentin, L; Catherwood, M; Montillo, M; Gaidano, G; Campo, E; Geisler, CH; Langerak, AW; Pospisilova, S; Lefranc, MP; Chiorazzi, N; Oscier, D; Jelinek, DF; Stilgenbauer, S; Belessi, C; Davi, F; Rosenquist, R; Ghia, P; Darzentas, N; Stamatopoulos, K, 2015: HIGHER-ORDER IMMUNOGLOBULIN SEQUENCE RELATIONS FOR MAJOR SUBSETS OF CHRONIC LYMPHOCYTIC LEUKEMIA: UNIQUENESS VERSUS EQUIVALENCE. HAEMATOLOGICA 100, p. 47 - 48
• Vardi, A; Stalika, E; Gkoufas, A; Karipidou, M; Maramis, C; Bikos, V; Pospisilova, S; Anagnostopoulos, A; Maglaveras, N; Chouvarda, I; Stamatopoulos, K; Hadzidimitriou, A, 2015: HIGH-THROUGHPUT T-CELL RECEPTOR GENE REPERTOIRE PROFILING IN CHRONIC LYMPHOCYTIC LEUKEMIA SUBSET #4: FURTHER EVIDENCE OF ANTIGENIC STIMULATION. HAEMATOLOGICA 100, p. 11 - 12
• Xochelli, A; Bikos, V; Polychronidou, E; Agathangelidis, A; Charlotte, F; Moschonas, P; Davis, Z; Colombo, M; Roumelioti, M; Sutton, LA; Groenen, P; Boudjoghra, M; Algara, P; Traverse-Glehen, A; Ferrer, A; Stalika, E; Karypidou, M; Kanellis, G; Kalpadakis, C; Mollejo, M; Pangalis, G; Vlamos, P; Amini, RM; Pospisilova, S; Gonzalez, D; Ponzoni, M; Anagnostopoulos, A; Giudicelli, V; Lefranc, MP; Espinet, B; Panagiotidis, P; Piris, MA; Du, M; Rosenquist, R; Papadaki, T; Belessi, C; Ferrarini, M; Oscier, D; Tzovaras, D; Ghia, P; Davi, F; Hadzidimitriou, A; Stamatopoulos, K, 2015: Unique Versus Common: Disease-Biased Immunoglobulin Gene Repertoires Along with Public Antigen Receptor Stereotypes in Marginal Zone B-Cell Lymphoproliferations. BLOOD 126(23)
• Vardi, A; Karipidou, M; Gemenetzi, A; Vlachonikola, E; Bikos, V; Stalika, E; Koravou, E; Maramis, C; Siorenta, A; Anagnostopoulos, A; Pospisilova, S; Maglaveras, N; Chouvarda, I; Stamatopoulos, K; Hadzidimitriou, A, 2015: Next Generation Sequence Immunoprofiling of the T-Cell Repertoire in Chronic Lymphocytic Leukemia Supports Selection By Shared Antigenic Elements. BLOOD 126(23)
• Bystry, V; Agathangelidis, A; Bikos, V; Sutton, LA; Baliakas, P; Hadzidimitriou, A; Stamatopoulos, K; Darzentas, N, 2015: ARResT/AssignSubsets: a novel application for robust subclassification of chronic lymphocytic leukemia based on B cell receptor IG stereotypy. BIOINFORMATICS 31(23), p. 3844 - 3846, doi: 10.1093/bioinformatics/btv456
• Baliakas, P; Strefford, JC; Bikos, V; Parry, M; Stamatopoulos, K; Oscier, D, 2015: Splenic marginal-zone lymphoma: ontogeny and genetics. LEUKEMIA & LYMPHOMA 56(2), p. 301 - 310, doi: 10.3109/10428194.2014.919636

2014

• Sutton, LA; Moschonas, P; Vardi, A; Bikos, V; Yan, XJ; Chatzouli, M; Anagnostopoulos, A; Belessi, C; Chiorazzi, N; Rosenquist, R; Tzovaras, D; Stamatopoulos, K; Hadzidimitriou, A, 2014: MATCHED PATTERN DISCOVERY ACROSS PAIRED IMMUNOGLOBULIN HEAVY AND LIGHT CHAINS IN CLL REVEALS UNIQUE SUBSET-DEFINING AMINO ACID ASSOCIATIONS. HAEMATOLOGICA 99, p. 50 - 50

2012

• Bikos, V; Stalika, E; Karypidou, M; Baliakas, P; Davis, Z; Algara, P; Kanellis, G; Dagklis, A; Traverse-Glehen, A; Hockley, S; Mollejo, M; Tsaftaris, A; Anagnostopoulos, A; Ponzoni, M; Berger, F; Felman, P; Gonzalez, D; Matutes, E; Piris, MA; Papadaki, T; Ghia, P; Oscier, D; Belessi, C; Darzentas, N; Stamatopoulos, K, 2012: Clonal Selection in the Ontogeny and Evolution of Splenic Marginal Zone Lymphoma Confirming the Existence of Distinct Molecular Subtypes. BLOOD 120(21)
• Ponzoni, M; Kanellis, G; Pouliou, E; Baliakas, P; Scarfo, L; Ferreri, AJM; Doglioni, C; Bikos, V; Dagklis, A; Anagnostopoulos, A; Ghia, P; Stamatopoulos, K; Papadaki, T, 2012: Bone Marrow Histopathology in the Diagnostic Evaluation of Splenic Marginal-zone and Splenic Diffuse Red Pulp Small B-cell Lymphoma. AMERICAN JOURNAL OF SURGICAL PATHOLOGY 36(11), p. 1609 - 1618, doi: 10.1097/PAS.0b013e318271243d

• Immunogenetics in the Next Generation Sequencing era: Deciphering the pathogenetic mechanisms in lymphoproliferative disorders, Grantová agentura ČR, 2019 - 2020
• Immunogenetics in the Next Generation Sequencing era: Deciphering the pathogenetic mechanisms in lymphoproliferative disorders, Grantová agentura ČR, 2019 - 2020
• Expression and function of activation-induced cytidine deaminase splice variants in normal B cell physiology and chronic lymphocytic leukemia (3SGA5792), Jihomoravský kraj, 2013 - 2016
• Functional and structural changes of microRNAs in lymphoproliferative malignancies and their impact on prognosis and prediction of therapy response (NT11218), Ministry of Health - Ministry of Health´s Departmental Research and Development Programme III (2010-2015), 2010 - 2015
• NGS-PTL - Next Generation Sequencing platform for targeted Personalized Therapy of Leukemia (306242), Evropská unie, 2012 - 2015
• SuPReMMe - Podpora profesního růstu a mezinárodní integrace výzkumných týmů v oblasti molekulární medicíny (CZ.1.07/2.3.00/20.0045), Ministerstvo školství, mládeže a tělovýchovy ČR, 2011 - 2014
• Functional and molecular characteristics of cancer and normal stem cells - identification of targets for novel therapeutics and therapeutic strategies (MSM0021622430), Ministerstvo školství, mládeže a tělovýchovy ČR, 2007 - 2013
• Real-time PCR soupravy pro diagnostiku v onkologii (FR-TI2/254), Ministerstvo průmyslu a obchodu ČR, 2010 - 2013
• Involvement of nuclear HMGB proteins in sensitizing of human cells to anticancer drugs inhibiting DNA topoizomerases (GAP301/10/0590), Czech Science Foundation - Standard Grants, 2010 - 2012
• Analysis of changes in genome and its expression in chronic lymphocytic leukemia patients during the disease development (NS10439), Ministry of Health - Departmental Programme of Research and Development (2008-2011), 2009 - 2011