Selected publications
2021
-
Kutashev, KO; Franek, M; Diamanti, K; Komorowski, J; Olsinova, M; Dvorackova, M, 2021: Nucleolar rDNA folds into condensed foci with a specific combination of epigenetic marks. PLANT JOURNAL 105(6), p. 1534 - 1548, doi: 10.1111/tpj.15130
-
Kolarova, K; Dadejova, MN; Loja, T; Lochmanova, G; Sykorova, E; Dvorackova, M, 2021: Disruption of NAP1 genes in Arabidopsis thaliana suppresses the fas1 mutant phenotype, enhances genome stability and changes chromatin compaction. PLANT JOURNAL 106(1), p. 56 - 73, doi: 10.1111/tpj.15145
-
Konecna, K; Sovakova, PP; Antekova, K; Fajkus, J; Fojtova, M, 2021: Distinct Responses of Arabidopsis Telomeres and Transposable Elements to Zebularine Exposure. INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES 22(1), doi: 10.3390/ijms22010468
-
Dogan, M; Pouch, M; Mandakova, T; Hlouskova, P; Guo, XY; Winter, P; Chumova, Z; Van Niekerk, A; Mummenhoff, K; Al-Shehbaz, IA; Mucina, L; Lysak, MA, 2021: Evolution of Tandem Repeats Is Mirroring Post-polyploid Cladogenesis in Heliophila (Brassicaceae). FRONTIERS IN PLANT SCIENCE 11, doi: 10.3389/fpls.2020.607893
-
Gelova, Z; Gallei, M; Pernisova, M; Brunoud, G; Zhang, XX; Glanc, M; Li, LX; Michalko, J; Pavlovicova, Z; Verstraeten, I; Han, HB; Hajny, J; Hauschild, R; Covanova, M; Zwiewka, M; Hoermayer, L; Fendrych, M; Xu, TD; Vernoux, T; Friml, J, 2021: Developmental roles of Auxin Binding Protein 1 in Arabidopsis thaliana. PLANT SCIENCE 303, doi: 10.1016/j.plantsci.2020.110750
-
Guo, X; Mandáková, T; Trachtová, K; Özüdoğru, B; Liu, J; Lysak, MA , 2021: Linked by ancestral bonds: multiple whole-genome duplications and reticulate evolution in a Brassicaceae tribe. MOLECULAR BIOLOGY AND EVOLUTION 38(5), p. 1695 - 1714, doi: 10.1093/molbev/msaa327
-
Freytag, C; Mathe, C; Rigo, G; Nodzynski, T; Konya, Z; Erdodi, F; Cseplo, A; Pozer, E; Szabados, L; Kelemen, A; Vasas, G; Garda, T, 2021: Microcystin-LR, a cyanobacterial toxin affects root development by changing levels of PIN proteins and auxin response in Arabidopsis roots. CHEMOSPHERE 276, doi: 10.1016/j.chemosphere.2021.130183
2020
-
Raxwal, VK; Simpson, CG; Gloggnitzer, J; Entinze, JC; Guo, WB; Zhang, RX; Brown, JWS; Riha, K, 2020: Nonsense-Mediated RNA Decay Factor UPF1 Is Critical for Posttranscriptional and Translational Gene Regulation in Arabidopsis. PLANT CELL 32(9), p. 2725 - 2741, doi: 10.1105/tpc.20.00244
-
Valuchova, S; Mikulkova, P; Pecinkova, J; Klimova, J; Krumnikl, M; Bainar, P; Heckmann, S; Tomancak, P; Riha, K, 2020: Imaging plant germline differentiation within Arabidopsis flowers by light sheet microscopy. ELIFE 9, doi: 10.7554/eLife.52546
-
Mazur, E; Gallei, M; Adamowski, M; Han, HB; Robert, HS; Friml, J, 2020: Clathrin-mediated trafficking and PIN trafficking are required for auxin canalization and vascular tissue formation in Arabidopsis. PLANT SCIENCE 293, doi: 10.1016/j.plantsci.2020.110414
-
Zhang, XX; Adamowski, M; Marhava, P; Tan, ST; Zhang, YZ; Rodriguez, L; Zwiewka, M; Pukysova, V; Sanchez, AS; Raxwal, VK; Hardtke, CS; Nodzynski, T; Friml, J, 2020: Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters. PLANT CELL 32(5), p. 1644 - 1664, doi: 10.1105/tpc.19.00869
-
Mandakova, T; Hlouskova, P; Windham, MD; Mitchell-Olds, T; Ashby, K; Price, B; Carman, J; Lysak, MA, 2020: Chromosomal Evolution and Apomixis in the Cruciferous Tribe Boechereae. FRONTIERS IN PLANT SCIENCE 11, doi: 10.3389/fpls.2020.00514
-
Mazur, E; Kulik, I; Hajny, J; Friml, J, 2020: Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in Arabidopsis. NEW PHYTOLOGIST 226(5), p. 1375 - 1383, doi: 10.1111/nph.16446
-
Adamusova, K; Khosravi, S; Fujimoto, S; Houben, A; Matsunaga, S; Fajkus, J; Fojtova, M, 2020: Two combinatorial patterns of telomere histone marks in plants with canonical and non-canonical telomere repeats. PLANT JOURNAL 102(4), p. 678 - 687, doi: 10.1111/tpj.14653
2019
-
Crhak, T; Zachova, D; Fojtova, M; Sykorova, E, 2019: The region upstream of the telomerase reverse transcriptase gene is essential for in planta telomerase complementation. PLANT SCIENCE 281, p. 41 - 51, doi: 10.1016/j.plantsci.2019.01.001
-
Fajkus, P; Peška, V; Závodník, M; Fojtová, M; Fulnečková, J; Dobias, Š; Kilar, A; Dvořáčková, M; Zachová, D; Nečasová, I; Sims, J; Sýkorová, E; Fajkus, J, 2019: Telomerase RNAs in land plants. NUCLEIC ACIDS RESEARCH , doi: 10.1093/nar/gkz695
-
Zwiewka, M; Bielach, A; Tamizhselvan, P; Madhavan, S; Ryad, EE; Tan, ST; Hrtyan, M; Dobrev, P; Vankova, R; Friml, J; Tognetti, VB, 2019: Root Adaptation to H2O2-Induced Oxidative Stress by ARF-GEF BEN1-and Cytoskeleton-Mediated PIN2 Trafficking. PLANT AND CELL PHYSIOLOGY 60(2), p. 255 - 273, doi: 10.1093/pcp/pcz001
-
Goffova, I; Vagnerova, R; Peska, V; Franek, M; Havlova, K; Hola, M; Zachova, D; Fojtova, M; Cuming, A; Kamisugi, Y; Angelis, KJ; Fajkus, J, 2019: Roles of RAD51 and RTEL1 in telomere and rDNA stability in Physcomitrella patens. PLANT JOURNAL 98(6), p. 1090 - 1105, doi: 10.1111/tpj.14304
-
Mandakova, T; Pouch, M; Brock, JR; Al-Shehbaz, IA; Lysak, MA, 2019: Origin and Evolution of Diploid and Allopolyploid Camelina Genomes Were Accompanied by Chromosome Shattering. PLANT CELL 31(11), p. 2596 - 2612, doi: 10.1105/tpc.19.00366
-
Mandakova, T; Zozomova-Lihova, J; Kudoh, H; Zhao, YP; Lysak, MA; Marhold, K, 2019: The story of promiscuous crucifers: origin and genome evolution of an invasive species, Cardamine occulta (Brassicaceae), and its relatives. ANNALS OF BOTANY 124(2), p. 209 - 220, doi: 10.1093/aob/mcz019
-
Schorova, S; Fajkus, J; Zaveska Drabkova, L; Honys, D; Schrumpfova, PP, 2019: The plant Pontin and Reptin homologues, RuvBL1 and RuvBL2a, colocalize with TERT and TRB proteins in vivo, and participate in telomerase biogenesis. PLANT JOURNAL 98(2), p. 195 - 212, doi: 10.1111/tpj.14306
-
Skokan, R; Medvecka, E; Viaene, T; Vosolsobe, S; Zwiewka, M; Muller, K; Skupa, P; Karady, M; Zhang, YZ; Janacek, DP; Hammes, UZ; Ljung, K; Nodzynski, T; Petrasek, J; Friml, J, 2019: PIN-driven auxin transport emerged early in streptophyte evolution. NATURE PLANTS 5(11), p. 1114 - 1119, doi: 10.1038/s41477-019-0542-5
-
Zdarska, M; Cuyacot, AR; Tarr, PT; Yamoune, A; Szmitkowska, A; Hrdinova, V; Gelova, Z; Meyerowitz, EM; Hejatko, J, 2019: ETR1 Integrates Response to Ethylene and Cytokinins into a Single Multistep Phosphorelay Pathway to Control Root Growth. MOLECULAR PLANT 12(10), p. 1338 - 1352, doi: 10.1016/j.molp.2019.05.012
2018
-
Robert, HS; Park, C; Gutièrrez, CL; Wójcikowska, B; Pěnčík, A; Novák, O; Chen, J; Grunewald, W; Dresselhaus, T; Friml, J; Laux, T, 2018: Maternal auxin supply contributes to early embryo patterning in Arabidopsis. NATURE PLANTS , doi: 10.1038/s41477-018-0204-z
-
Kania, U; Nodzynski, T; Lu, Q; Hicks, GR; Nerinckx, W; Mishev, K; Peurois, F; Cherfils, J; De Rycke, R; Grones, P; Robert, S; Russinova, E; Friml, J, 2018: The Inhibitor Endosidin 4 Targets SEC7 Domain-Type ARF GTPase Exchange Factors and Interferes with Subcellular Trafficking in Eukaryotes. PLANT CELL 30(10), p. 2553 - 2572, doi: 10.1105/tpc.18.00127
2021
-
Abdelhakim, LOA; Rosenqvist, E; Wollenweber, B; Spyroglou, I; Ottosen, CO; Panzarova, K, 2021: Investigating Combined Drought- and Heat Stress Effects in Wheat under Controlled Conditions by Dynamic Image-Based Phenotyping. AGRONOMY-BASEL 11(2), doi: 10.3390/agronomy11020364
-
Spyroglou, I; Skalak, J; Balakhonova, V; Benedikty, Z; Rigas, AG; Hejatko, J, 2021: Mixed Models as a Tool for Comparing Groups of Time Series in Plant Sciences. PLANTS-BASEL 10(2), doi: 10.3390/plants10020362
-
Spyroglou, I; Rybka, K; Rodriguez, RM; Stefanski, P; Valasevich, NM, 2021: Quantitative estimation of water status in field-grown wheat using beta mixed regression modelling based on fast chlorophyll fluorescence transients: A method for drought tolerance estimation. JOURNAL OF AGRONOMY AND CROP SCIENCE , doi: 10.1111/jac.12473
-
Lycka, M; Peska, V; Demko, M; Spyroglou, I; Kilar, A; Fajkus, J; Fojtova, M, 2021: WALTER: an easy way to online evaluate telomere lengths from terminal restriction fragment analysis. BMC BIOINFORMATICS 22(1), doi: 10.1186/s12859-021-04064-0
2020
-
Samsonova, Z; Kiran, NS; Novak, O; Spyroglou, I; Skalak, J; Hejatko, J; Gloser, V, 2020: Steady-State Levels of Cytokinins and Their Derivatives May Serve as a Unique Classifier of Arabidopsis Ecotypes. PLANTS-BASEL 9(1), doi: 10.3390/plants9010116
-
Michailidis, GE; Spyroglou, II; Zaridis, D; Rigas, AG, 2020: A Method of Estimating the Partial Power Spectrum of a Bivariate Point Process and an Application to a Neurophysiological Data Set. JOURNAL OF STATISTICAL THEORY AND PRACTICE 14(3), doi: 10.1007/s42519-020-00105-8